Riza Nugraha

Frontend Software Engineer

@TheHyveNL

March 23, 2016 | By Janneke Schoots 0

  If you’re familiar with the tranSMART application, you have probably already experienced that getting data into tranSMART isn’t that trivial at a first glance. An early days Kettle ETL job:                     As you might know, tranSMART Foundation organizes an interesting series of TranSMART trainings throughout […]

March 21, 2016 | By Sjoerd van Hagen 0

In the MRC MATURA project The Hyve has been working with Queen Mary University London to enable GWAS analysis within tranSMART for Postgres, sponsored by Janssen.  As detailed below, we have ported the GWAS functionality in Oracle to Postgres, set up pipelines for loading the reference and analysis data and provided training and example code […]

January 4, 2016 | By Ward Weistra 0

  17-19 October the Netherlands Cancer Institute hosted the 2015 tranSMART Foundation Annual Meeting. With three days of talks, trainings, discussions, poster sessions and over 160 attendees this year’s meeting has been the largest meeting up until now. Together with CTMM TraIT and IMI TRANSLOCATION we gave 4 talks in the science and technology tracks, displayed 3 […]

December 15, 2015 | By Pieter Lukasse 0

Last week we had the privilege of joining the first cBioPortal hackathon, hosted by Dana Farber Cancer Institute in Boston. The group (with developers from MSKCC, Dana Farber, The Hyve and Princess Margaret Cancer Centre) was divided into four smaller groups working on important topics for the short term like performance improvements and improved data loading […]

November 11, 2015 | By Piotr Zakrzewski 0

One of challenges  we had to tackle this year for one our customers, The Maastricht Study, was building a Data Download Portal for tranSMART. TranSMART allows you to export all the data just fine by itself, so you might ask why would you need a dedicated app for that. The thing is however, that tranSMART is not […]

October 23, 2015 | By Stefan Payralbe 0

The Hyve hosted a company visit for the RSG. This event was a rewarding opportunity to provide insight into the various activities and working philosophy of the company. Around 20 young bioinformaticians from all over the Netherlands attended this successful company visit. (PhD-) students and young professionals from the fields of bioinformatics and systems biology […]

August 12, 2015 | By Jojanneke Blaak 0

Our CEO, Kees van Bochove, was interviewed by DNAdigest about the aims and activities of The Hyve. Read the full interview on the website of DNAdigest as well as below: The Hyve is a 30 person open source bioinformatics services company from Utrecht, Netherlands, and Cambridge, MA, USA. Not so long ago, we invited them to […]

July 22, 2015 | By Kees van Bochove 0

  The cBioPortal for Cancer Genomics provides visualization, analysis and download of large-scale cancer genomics data sets. The code, which was developed at Memorial Sloan Kettering Cancer Center has recently been put into the public domain under a GNU Affero General Public License v3.0, and the Pistoia Alliance is exploring ways to build a sustainable community […]

June 22, 2015 | By Sjoerd van Hagen 0

To prepare for the yearly ND4BB Translocation meeting in Bremen in July, The Hyve hosted a workshop to discuss the next set of requirements for the ND4BB InfoCentre to be built for Translocation. Translocation is part of the IMI antimicrobial resistance (AMR) program New Drugs for Bad Bugs (ND4BB). The goal of Translocation is to find […]

June 22, 2015 | By Pieter Lukasse 2

The Hyve, together with Proventa International, organized its first Innovation Spotlight Session on Open Source Technologies for Precision Medicine. We were honored with a great attendance from industry and academia and were happy to see new ideas arise for new software implementations serving the translational research domain. The interest and support of pharma companies for open […]

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